(dmg) where download Visualization of peptide and protein identification results from multip Mojave

[igogrecoctio]

Main category - Education
Sub category - Science
Developer - CompOmics
Filesize - 113357
Title - PeptideShaker


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PeptideShaker 1.16.39


The growing interest in the field of proteomics has increased the demand for software tools and applications that process and analyze the resulting data. And even though the purpose of these tools can vary significantly, they usually share a basic set of features, including the handling of protein and peptide sequences, the visualization of (and interaction with) spectra and chromatograms, and the parsing of results from various proteomics search engines. Developers typically spend considerable time and effort implementing these support structures, which detracts from working on the novel aspects of their tool. In order to simplify the development of proteomics tools, we have implemented an open-source support library for computational proteomics, called compomics-utilities. The library contains a broad set of features required for reading, parsing, and analyzing proteomics data. compomics-utilities is already used by a long list of existing software, ensuring library stability and continued support and development. As a user-friendly, well-documented and open-source library, compomics-utilities greatly simplifies the implementation of the basic features needed in most proteomics tools. Implemented in 100% Java, compomics-utilities is fully portable across platforms and architectures. Our library thus allows the developers to focus on the novel aspects of their tools, rather than on the basic functions, which can contribute substantially to faster development, and better tools for proteomics.
ProteomeDigestSim
The mass spectrometry proteomics data have been deposited to the ProteomeXchange Consortium via the PRIDE partner repository [1] with the dataset identifier ."
Changes in PeptideShaker 1.16.1 (March 2. 2017):
FEATURE IMPROVEMENT: PeptideShaker can now be run from paths containing special characters.
last"Manipulate 1413067675109"Coda 6080050924913"2.1, MediaFire.extension mobile",,extension iphone 215572910539.10.12.6




Version MacOS macpkg.icu/?id=61024&kw=PeptideShaker-v-1.19.39-uSg.app {103154 kb}

Recomended Mac macpkg.icu/?id=61024&kw=peptideshaker-vers.1.16.43-afrvnp.pkg {130360 kb}

10.14.1 macpkg.icu/?id=61024&kw=9ORB.PeptideShaker.ver.1.18.39.pkg {133761 kb}


LIBRARY UPDATE: Updated utilities to version 4.0.0. LIBRARY UPDATE: Updated X!Tandem Parser to version 1.10.0, fixing a bug in the handling of multiple fixed PTMs of the same type on the same peptide. Oops, there was an error! FEATURE IMPROVEMENT: Updated Ensembl to version 81. Notice: USB drive is needed for a clean install on your Mac’s startup drive. If you plan to clean install macOS on a non-startup drive, you don't need it. FEATURE IMPROVEMENT: Extended the reports to include more information on peptide uniqueness. another program (similar to AUTOHD) for analysis of H/D-exchange spectra [130] NEW FEATURE: The report created when loading a project in the waiting dialog is now automatically saved as part of the project details.



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